PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024992492.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | GeBP | ||||||||
Protein Properties | Length: 199aa MW: 23260.6 Da PI: 5.0152 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 40.1 | 1e-12 | 93 | 183 | 11 | 97 |
DUF573 11 DeivlLqGlidfkaktgkspsddidafyefvkksis...fkvsksqlveKirrLKkKfkkkvkkaksgkepsfs.kehdqkifelskkiWg 97 ei lL+G++df +++g p+ d +++ +f+ + ++ f +l K+ +L +f ++ +k+++g++++ + + +++if ls+++Wg XP_024992492.1 93 EEINLLKGILDFYHTNGRYPYPDSNDLQNFFINWVQergFYRDAMDLNRKMESLNLRFLTNTEKKSNGEDIEANmDPTEREIFRLSNRVWG 183 69****************9998877777777666661115667789999***************99999988752789************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MDDPFRPPHS HFYSGGSTRS GSSGSTSKRK ITESEEEDVD ITGLSTPTKR HQTESSWTRK 60 ETEDTAATTT TTTSISRRWN EQTRPSPCPW RREEINLLKG ILDFYHTNGR YPYPDSNDLQ 120 NFFINWVQER GFYRDAMDLN RKMESLNLRF LTNTEKKSNG EDIEANMDPT EREIFRLSNR 180 VWGRENDDDA MMVDLIQMM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00270.1 | 1e-06 | GeBP family protein |