PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024992461.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | FAR1 | ||||||||
Protein Properties | Length: 585aa MW: 68199.4 Da PI: 6.7066 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 63.6 | 5.6e-20 | 132 | 226 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +Y++YA+evGF+vr s++k + ++g+it+r +vCskeg++ ++ + ++ r+++++r gC a+lk++ k + ++ev+k+ ++HnH l XP_024992461.1 132 MYCKYANEVGFDVRLSNKKIN-KKGRITSRFYVCSKEGRPPSKYFDsldilpGDRMIRNSNVKRSGCGACLKIHFVKeRRQYEVYKFIEQHNHML 225 8***************98887.6677**************99998899**99999999****************99989**************99 PP FAR1 90 a 90 + XP_024992461.1 226 F 226 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 585 aa Download sequence |
MDYMPFNEIF SKDIVEESSV FDSMNDCQDF DYGGDNATAV NNETIEDQAN YSMRNEDGCN 60 DRNETVSEHN DGVFVDFVDI DVASLSNEAE DYQSDAMGET NDGSKFWFPN VDAEYKPIVG 120 DEFETVESVE RMYCKYANEV GFDVRLSNKK INKKGRITSR FYVCSKEGRP PSKYFDSLDI 180 LPGDRMIRNS NVKRSGCGAC LKIHFVKERR QYEVYKFIEQ HNHMLFNKEE MRFSRSKKQL 240 HYADHKNVFH GSSSKVGITK SHRFRKAITG GVDCSGGTVR DHQNFKRDMA YFVGNKDAQM 300 LLNVMSNRRK VCPEFFFEYK CDDKELLAIF WADETVRSNY REFGDAISFD ATFRTNKHXM 360 IFVPFVAIDN HKKSVVVGVA LIHNEYVVDY TWVLKAFVKA HERQPRFVIT DQCASMKQAI 420 LIAFPESKHR LCMWHITKKL KSKINNYLQH RTPFVSEFNK LVWNVHLAPD EFEMKWLNXM 480 DSYGLRGDSW FDELYQIRES WIPAYYKDYH MSGLMKTTSR SESINAFFNV YAYFWHDLVI 540 FLRSFDNAIE SQRTTHGSLE VTTKSTVPRL VSPCKLEAHA AEVYT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-65 | FAR1 family protein |