PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024992109.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family FAR1
Protein Properties Length: 757aa    MW: 86389.5 Da    PI: 6.7038
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024992109.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1652e-2059152190
            FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 
                     +fY+++Ak++GFs+r+++++ +    + it+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ k+      +w++t +++ HnHel 
  XP_024992109.1  59 EFYCSFAKQCGFSIRRHRTRGKdGVGRGITRRDFTCHRGGYPQIKPSEDGKVQRNRKSSRCGCQAYMRIVKRAdfdVPEWRITGFSNIHNHELL 152
                     6***************999887455667********************9*******************98887676789*************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 757 aa     Download sequence    
MPEIMSVLKE TSENGTDLSA DDIGTIEEIP EDTILSRQTS VNLVPFIGQR FVSQDAAYEF  60
YCSFAKQCGF SIRRHRTRGK DGVGRGITRR DFTCHRGGYP QIKPSEDGKV QRNRKSSRCG  120
CQAYMRIVKR ADFDVPEWRI TGFSNIHNHE LLKSHDVQLL PAYCTMSSDD KSRICMYAKA  180
GMSVRQMLRL MELEKGVKLG CLPFTEIDVR NLLQSFRNVD HDNDAIDLLK MCKDKKDKDP  240
NFKYNFKIDA NNRLEHIAWS YASSVRSFES FGDVVVFDTT HRLDAYDMLL GIWLGVDNYG  300
TNCFFSCVLL RDENMQSFCW AIKTFLGFMN GKAPETILTD QNMWLKEALA IEMPRTKHAF  360
CIWHIISKFS DWFSLLLGSQ YDQWKAEFHG LYNLHSVDEF ELGWREMVDT YGLHGNKHIV  420
SLYALRTFWA LPFLRCYFFA GMTSTFQPES INVFIQRFLS AQSVLENFVE QVAAVIDAKD  480
QAASKQKMIR RNQKVSLKTG SPIESHAATV LTPYAFCKLQ EQLVLAPQYA SLLVDESYFI  540
VRHHTEMNGG CKVLWAPHDE FISCSCHDFE FSGILCRHVL RVLSTNNCFH IPYQYLPIRW  600
RDSFSPPSNY TKPLLIPTSG QPTGNIQMLQ SMVSTLVSES METDERLNFA CGQINLVLSR  660
LKEFPGPSNG VNDLSYDHSP PDSLILPEVE DSDGIVQSFT GNPHESLTIG KLKERRSDPL  720
RKRRRCSVAC CGQFGHDSNE CPLMESDDIN GDGLGFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1721725RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.10.0FAR1 family protein