PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024992109.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | FAR1 | ||||||||
Protein Properties | Length: 757aa MW: 86389.5 Da PI: 6.7038 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 65 | 2e-20 | 59 | 152 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + it+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ k+ +w++t +++ HnHel XP_024992109.1 59 EFYCSFAKQCGFSIRRHRTRGKdGVGRGITRRDFTCHRGGYPQIKPSEDGKVQRNRKSSRCGCQAYMRIVKRAdfdVPEWRITGFSNIHNHELL 152 6***************999887455667********************9*******************98887676789*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 757 aa Download sequence |
MPEIMSVLKE TSENGTDLSA DDIGTIEEIP EDTILSRQTS VNLVPFIGQR FVSQDAAYEF 60 YCSFAKQCGF SIRRHRTRGK DGVGRGITRR DFTCHRGGYP QIKPSEDGKV QRNRKSSRCG 120 CQAYMRIVKR ADFDVPEWRI TGFSNIHNHE LLKSHDVQLL PAYCTMSSDD KSRICMYAKA 180 GMSVRQMLRL MELEKGVKLG CLPFTEIDVR NLLQSFRNVD HDNDAIDLLK MCKDKKDKDP 240 NFKYNFKIDA NNRLEHIAWS YASSVRSFES FGDVVVFDTT HRLDAYDMLL GIWLGVDNYG 300 TNCFFSCVLL RDENMQSFCW AIKTFLGFMN GKAPETILTD QNMWLKEALA IEMPRTKHAF 360 CIWHIISKFS DWFSLLLGSQ YDQWKAEFHG LYNLHSVDEF ELGWREMVDT YGLHGNKHIV 420 SLYALRTFWA LPFLRCYFFA GMTSTFQPES INVFIQRFLS AQSVLENFVE QVAAVIDAKD 480 QAASKQKMIR RNQKVSLKTG SPIESHAATV LTPYAFCKLQ EQLVLAPQYA SLLVDESYFI 540 VRHHTEMNGG CKVLWAPHDE FISCSCHDFE FSGILCRHVL RVLSTNNCFH IPYQYLPIRW 600 RDSFSPPSNY TKPLLIPTSG QPTGNIQMLQ SMVSTLVSES METDERLNFA CGQINLVLSR 660 LKEFPGPSNG VNDLSYDHSP PDSLILPEVE DSDGIVQSFT GNPHESLTIG KLKERRSDPL 720 RKRRRCSVAC CGQFGHDSNE CPLMESDDIN GDGLGFL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 721 | 725 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10240.1 | 0.0 | FAR1 family protein |