PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024991591.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NF-YB | ||||||||
Protein Properties | Length: 182aa MW: 19974.4 Da PI: 5.7326 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 159 | 7.5e-50 | 25 | 114 | 2 | 91 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91 ++q+r+lPianv+rimkk lP+nak+sk+aketvqecvsefisf+t+ea+dkcqrekrktingddllwa++tlGf+dyv +lk yl+ky XP_024991591.1 25 KDQERLLPIANVGRIMKKSLPGNAKVSKEAKETVQECVSEFISFITGEAADKCQREKRKTINGDDLLWAMTTLGFQDYVGSLKSYLSKYV 114 79**************************************************************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MTGKRTQTGS TRTLSSSNVS DGSSKDQERL LPIANVGRIM KKSLPGNAKV SKEAKETVQE 60 CVSEFISFIT GEAADKCQRE KRKTINGDDL LWAMTTLGFQ DYVGSLKSYL SKYVGTCDSS 120 SHTDIGVTEI GCDVSDSTPA QSISQGFNDL YQIVGHGDEL ISMVKLHEAK TVMMTQDQRF 180 EW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 8e-53 | NF-YB family protein |