PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024991326.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 93aa MW: 10632.9 Da PI: 8.5468 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.9 | 7.6e-08 | 20 | 60 | 15 | 54 |
HHHHHHHHHHCTSCCC....TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkas.kapskKlsKaeiLekAveYIksL 54 +i ++L++l+P++ ++s K+s + +L+++++YI+sL XP_024991326.1 20 QIAGLVSKLQQLIPHNIhTTHSDKVSASRVLQETCNYIRSL 60 56666789*******77699*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 93 aa Download sequence |
MSSRRSRSRQ PRVSRISDDQ IAGLVSKLQQ LIPHNIHTTH SDKVSASRVL QETCNYIRSL 60 HREVDDLSER LSELLQSTDT NSAEADIIRS LFM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26945.1 | 9e-34 | bHLH family protein |