PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024991230.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 420aa    MW: 46482 Da    PI: 7.5385
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024991230.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.65.8e-053163541255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  XP_024991230.1 316 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 354
                     7788899*********998.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    
MESENFHQQH HQDHQPVLDS SCYGLSWSQN PILNSTSNDT NSRDLKQQLG SNMDFAPCHN  60
TSSSPLVHVL GLPWNNSINV TSNPVENFMT HELRRLARIK DEFSGSESYP KFSEMISSSP  120
TSSIEDLHLN PSSGYNNNQD LLLRTFSNGC QIKGGQLIDQ FPDDTTPNNH FQNCSNRISS  180
RGTFSQILPT INISNLNQSP AAISSDSFDM NLPALDLFGS PRLNGNFSHP YSFNPHQLGS  240
FFKDTCLSYG LDKMHQPNHR PVICPSKISS AFNTRTSCTE AKRPASNYMD TNAPRATIPK  300
KSKLEPRASC APFKVRKEKL GDRIAALQQL VAPFGKTDTA SVLMEAIGYI KFLQNQVETL  360
SVPYMKSTQK ANRTSKQGVS VMIDENEEAT KDLRSRGLCL VPLPCLSYVT DGGGGIWSGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.15e-55bHLH family protein