PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024991230.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 420aa MW: 46482 Da PI: 7.5385 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.6 | 5.8e-05 | 316 | 354 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq XP_024991230.1 316 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 354 7788899*********998.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 420 aa Download sequence |
MESENFHQQH HQDHQPVLDS SCYGLSWSQN PILNSTSNDT NSRDLKQQLG SNMDFAPCHN 60 TSSSPLVHVL GLPWNNSINV TSNPVENFMT HELRRLARIK DEFSGSESYP KFSEMISSSP 120 TSSIEDLHLN PSSGYNNNQD LLLRTFSNGC QIKGGQLIDQ FPDDTTPNNH FQNCSNRISS 180 RGTFSQILPT INISNLNQSP AAISSDSFDM NLPALDLFGS PRLNGNFSHP YSFNPHQLGS 240 FFKDTCLSYG LDKMHQPNHR PVICPSKISS AFNTRTSCTE AKRPASNYMD TNAPRATIPK 300 KSKLEPRASC APFKVRKEKL GDRIAALQQL VAPFGKTDTA SVLMEAIGYI KFLQNQVETL 360 SVPYMKSTQK ANRTSKQGVS VMIDENEEAT KDLRSRGLCL VPLPCLSYVT DGGGGIWSGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27660.1 | 5e-55 | bHLH family protein |