PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_024990995.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 847aa MW: 97657.5 Da PI: 7.493 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 88.3 | 1.1e-27 | 90 | 193 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkle 82 +fY+eYA+++GFs+ +++s++sk+++e+++++f Cs++g+++e++k+ e+++ +r+ ++t+Cka+++vk++ dgkw ++++e XP_024990995.1 90 SFYQEYARSMGFSTAIQNSRRSKTSREFIDAKFACSRYGTKREHDKSfnrprsrqgsnqdPENASGRRSCSKTDCKASMHVKRRPDGKWIIHRFE 184 5*********************************************99***999998876666777999************************** PP FAR1 83 leHnHelap 91 +eHnHel p XP_024990995.1 185 KEHNHELLP 193 ******975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 847 aa Download sequence |
MDIDLRLPSG ENEKEEKEEA KEMSNMMDGE HKMHSDDVLG RDMVGIRDKL PPDSDGGVNS 60 PSVDMVDFKE DINLEPIAGM EFESHGEAYS FYQEYARSMG FSTAIQNSRR SKTSREFIDA 120 KFACSRYGTK REHDKSFNRP RSRQGSNQDP ENASGRRSCS KTDCKASMHV KRRPDGKWII 180 HRFEKEHNHE LLPAQAVSEQ TRKMYAAMAR QFAEYKNVVG LKNDSNNPFE KGRNMALEAG 240 EANILCKFFM QMQSINSNFF YAIDIGEDQR LKNMLWVDAK TRHDYTNFCD VVSFDTSYVK 300 NKYRIPLALF IGVNQHYQFM LLGCALLSDE TTATYSWVMQ TWLTAMGGRV PKVVITDKDQ 360 YLESVVSQVF PSSKHCFCLW NIMGKISEAL NQVIKQHGNF MAKFEKCIYR SWTDEEFEKR 420 WFKMVNRFGL KDFDWMQSLY ESRKQWVPIY MRDVLLAGMS TLQRSESVNC SFDKYVHRKT 480 SMQEFVRQYE TIIQDRYEEE AKGDSDSWNK PPTLRSPSPF EKHVSSIYTH AVFKKFQSEV 540 LGAVACMPKK EAQEDMIITF RVSDFEKSMD FNVTYNESTT EVSCMCRLFE FKGFLCRHAM 600 IVLQICGLSA IPSQYILKRW TKDVKNRCLI SEGPEQVQYR VQRYNDLCQR AIKLGEEGSL 660 SQESYNMALR ALEDVYANCV CLNNSNKNLI EAGTSTAPGV LRIEEDNQSR NMRTNKKKNP 720 MKKRKVNSEQ DIMTVGAQDS LQQLDKLSSR SVTLDGYFGP QQSMQGMVQL NLMAPSRENY 780 YGNQQAIQGL GQLNSIAPNH ESYYGAQPTL HGLGQMDFFR TPGFTYGIRE EPNVRTTQLH 840 DDGSRHA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G22170.2 | 0.0 | FAR1 family protein |