PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024990850.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

DBB

Protein Properties

Length: 207aa MW: 23137.9 Da PI: 6.7623

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024990850.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.7	2e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++lfC ++ lC+ C ++ H XP_024990850.1 4 LCDVCERAAAILFCAADEAALCRACDEKVH 33 7****99****************998 PP
2	zf-B_box	23.7	9.7e-08	52	91	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 + ++C+ +e+ ++ ++C +++ lC +C + H g H XP_024990850.1 52 DVPRCDICENAPAFFYCGIDGSSLCLQCDMIVHVGgkrtH 91 5799**************************9995544455 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MRTLCDVCER AAAILFCAAD EAALCRACDE KVHMCNKLAS RHVRVGLADP SDVPRCDICE 60 NAPAFFYCGI DGSSLCLQCD MIVHVGGKRT HGRYLLLRQR VEFPGDRSGR DDELGSNPVD 120 PGEARREPNY QPKHTTRDNQ HHRLSSIGML ENNTDGVGRM ENKLIDLNSK PQRMHGQTSN 180 NQQEDGLGDY HSRRCIVSPE SRGDQPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	4e-77	DBB family protein