PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024990848.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | DBB | ||||||||
Protein Properties | Length: 210aa MW: 23198.1 Da PI: 6.8995 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 22.7 | 2.1e-07 | 4 | 33 | 5 | 34 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++lfC ++ lC+ C ++ H XP_024990848.1 4 LCDVCERAAAILFCAADEAALCRACDEKVH 33 7******99******************998 PP | |||||||
2 | zf-B_box | 23.7 | 9.9e-08 | 52 | 91 | 2 | 37 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 + ++C+ +e+ ++ ++C +++ lC +C + H g H XP_024990848.1 52 DVPRCDICENAPAFFYCGIDGSSLCLQCDMIVHVGgkrtH 91 5799**************************9995544455 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MRTLCDVCER AAAILFCAAD EAALCRACDE KVHMCNKLAS RHVRVGLADP SDVPRCDICE 60 NAPAFFYCGI DGSSLCLQCD MIVHVGGKRT HGRYLLLRQR VEFPGDRSGR DDELGSNPVD 120 PGEARREPNY QPKHTTRDNQ HHRLSSIGML ENNTDGVGRM ENKLIDLNSK PQRMHGQTSN 180 NQEQGMDISG SNNDCASVVP VGSFKREPGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38960.1 | 2e-84 | DBB family protein |