PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024990771.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family Nin-like
Protein Properties Length: 765aa    MW: 86290.1 Da    PI: 6.3459
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024990771.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK88.94.1e-28511561252
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     e +is+ +l++yF +++kdAAk++gvc+T+LKriCR++GI RWP+Rkik++
  XP_024990771.1 511 ERNISFPVLQQYFPGSLKDAAKSIGVCPTTLKRICREHGITRWPSRKIKKV 561
                     789**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 765 aa     Download sequence    
MPQTTTMFGS MKENALDFSR MDQISYDLSF SNPWDSSSSY LNSSETYLRR LNPNPSHRYF  60
KDEIDRLIQA IEYLKESTRD IDILIQLWLP VPRGGECVLT TXDQPFILNS ESNXLLDYRQ  120
ISRSQHFTTD EDSEAFLGLP SLVFLKKYPM CTPAFQFLGK EEDPXIDIAQ QLXLGGSLHL  180
PVFELGSGTC LGVIEIVTTS QNVSYHDPLN NIXKALEAFD LRSSEFLIHP KLEDCNGSYQ  240
VVLAEIREVL KSVCETHCFP LAQTWSLCTQ QGRGGCQQQS ATCISVISSA SYVYNPHVLG  300
FHEACAERHL LRGEGIAGKA LGTNKPCFAT DIKAFCRTEY PLADHARMFG LGGAVAIRLR  360
STYMGPVDFI LEFFLPHDCR NEEEQKHILS SISSVIQHVS RSLRVINDEE LAGEDSSSVK  420
ETATQDASSW ISHMLDAQQR GESFIVSMGS HKEEPEEFKV INQWDYHEKS IYRRSTLPEC  480
AKQREPNLGP KGRRRSSGTR RSEEKRRVKA ERNISFPVLQ QYFPGSLKDA AKSIGVCPTT  540
LKRICREHGI TRWPSRKIKK VGHSLKKLQL IIDSVQGAEG TIQLESFYTN FPELSSPVSP  600
SPKPTNDCVN LFKSQKTSSC SSSCASHNSG SSPLRTQRDT HVDYHHSNEV LVPLLKRSNP  660
ISRDEGGFRV KAIYGEEKIR LSMSQHWDLG DLQREIMRSF SIDDMDNITL KYLDDDSEWV  720
LLTCDADLEE CMDLNTSSKR CTIKLFLHQS FHPESGSSFT GDGPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76350.11e-168Nin-like family protein