PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024990610.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | FAR1 | ||||||||
Protein Properties | Length: 667aa MW: 77398.1 Da PI: 9.6794 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 45.1 | 3.2e-14 | 35 | 120 | 1 | 80 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtk 80 k+Y++YA+e+GF+vr s++k + + g+it+r +vCskeg+++++ + ++ r+++ +r gC a+lk+++ + +++ev++ XP_024990610.1 35 KMYRKYANEAGFDVRLSNKKIN-KLGRITSRFYVCSKEGRPQSKYFDsldvlpGGRTIRNSNIKRSGCGACLKIHLVNePNQYEVYN 120 68**************998887.7777****************9999999999899999*****************99889999976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 667 aa Download sequence |
MGETSTGSKY WVPSVDVKYK PKVGDSFESV ESAEKMYRKY ANEAGFDVRL SNKKINKLGR 60 ITSRFYVCSK EGRPQSKYFD SLDVLPGGRT IRNSNIKRSG CGACLKIHLV NEPNQYEVYN 120 SKVGITKSHR FMKAVKGVVD SSGGTVRDHQ NFKRDMXYFV GNKDAQMLLN VMDNRRKVCP 180 EFFFEYKCDD KELLAIFWAD ETARSNYREF GDAISFDATF RTNKHAMIFV PFVAIDNHKK 240 SVVVGAALIH NESVVDYTWV LKAFLKAHGR QPRFVITDQC ASMKQAIPIA FPESRHRLCM 300 WHITKKVKSK ISNHLQHRTQ FVSEFNKLVW NVHLGPNEFE MQWNNLIDFY GLRGDPWFDD 360 LYNIRESWIL AYYKDFHMSG LMKTTSRSES INAFFNVYAH FWHDLVVFLR SFDNAIESQR 420 ATHGSLEVTT KSTIPRLVSP CKLEAHAAEV YTRTIFFEIQ KELRKAVWLC GWDGFTDNGE 480 TRVYIITHKN KASKVTTKYT VMLNDEVDRI PDKYILRRWR RDLVPVEWLP AXFRYGEVDA 540 EKERLMSLAY SYFERILGRV RNEKDILTRF VDQLEQWDSK VDIELPLQSH TEETTASIKE 600 FLGVSQPETV DVLPPTGIRN KGCGTGKRLI SAAEKAISNR KKQKRKCRLC GQMATHDSRN 660 CPKRDYI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-60 | FAR1 family protein |