PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024990517.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | FAR1 | ||||||||
Protein Properties | Length: 750aa MW: 86590 Da PI: 6.6481 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 56.1 | 1.3e-17 | 195 | 283 | 2 | 84 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 +Y++YA ++GF++r+ +k++ +ngei +r+fvCs+eg++++++ + e++ r+++ +r+gC+a++k++++k ++ +e++++++e XP_024990517.1 195 MYRAYADNAGFDIRMYVKKTN-KNGEIQTRWFVCSREGNPKKKDFDslymqsGERRYRNTNIKRCGCNACIKIHLTKdRACYEIYEFVEE 283 8**************987776.8999****************99999**987778888999***************98999*****9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 750 aa Download sequence |
MVFAKIFGNK YPTEGSMPIC RLGSRILDHK FKPADIGMFA PMLDIAHGTG PFAAEPSATE 60 IDYDMAEDVK LLLPMVATVL DKMDKVHQIA TATVERCFSA MKIVKSNLRN KISDEFFNAA 120 MICTIEKEAL LAVSNDDPNY FFPSDLDGIT YSQQEVDYDI GESSEGIKFF IPKVDDAHKP 180 NMKAQYATIN EVKRMYRAYA DNAGFDIRMY VKKTNKNGEI QTRWFVCSRE GNPKKKDFDS 240 LYMQSGERRY RNTNIKRCGC NACIKIHLTK DRACYEIYEF VEELSVIFWA DEVARINYKE 300 FGDVISFDGT FRTNKHAMIF VSFLAVDNHK ASVVVGSALI NGETIDNFTW VLNVFLKCHA 360 KQPVFVITDQ CSTMKQAIPK VFTESKHRLC MWHIMKKVPS KVSVALNHDP TFNKVINKLV 420 WNIHIGPSEF ESRWNEMIDK YNLAGDTWFT EMYEIRHSWI PAYYKDXPMS GLMKTTSRSE 480 SSNSYINIYE SYWFDLVQFL NNYDVAIEKQ RYRQFVHQTV TRTTNPKFVT PLRLESHASS 540 IYCRNVFFDI QKEIKKAVWF CAIETVECRD DFKSFMGRNY STNTVECDCN LFTRNGYLCR 600 HAFKVLINDE VECIPEKYVL RRWKRELVPV QIQSARVRYG EVNAEKEKSI IDVYSKIDDI 660 ISIESNDQSI LDRLGRNLDK FMVDIEKEVP YEDPSQQKLD AIRDHLGVSI PDEVDILPPS 720 GIRNKGCETG KRLLELDLSV LLESVVDAIC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 5e-49 | FAR1 family protein |