PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024990517.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family FAR1
Protein Properties Length: 750aa    MW: 86590 Da    PI: 6.6481
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024990517.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR156.11.3e-17195283284
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 
                     +Y++YA ++GF++r+  +k++ +ngei +r+fvCs+eg++++++ +       e++ r+++ +r+gC+a++k++++k ++ +e++++++e
  XP_024990517.1 195 MYRAYADNAGFDIRMYVKKTN-KNGEIQTRWFVCSREGNPKKKDFDslymqsGERRYRNTNIKRCGCNACIKIHLTKdRACYEIYEFVEE 283
                     8**************987776.8999****************99999**987778888999***************98999*****9876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 750 aa     Download sequence    
MVFAKIFGNK YPTEGSMPIC RLGSRILDHK FKPADIGMFA PMLDIAHGTG PFAAEPSATE  60
IDYDMAEDVK LLLPMVATVL DKMDKVHQIA TATVERCFSA MKIVKSNLRN KISDEFFNAA  120
MICTIEKEAL LAVSNDDPNY FFPSDLDGIT YSQQEVDYDI GESSEGIKFF IPKVDDAHKP  180
NMKAQYATIN EVKRMYRAYA DNAGFDIRMY VKKTNKNGEI QTRWFVCSRE GNPKKKDFDS  240
LYMQSGERRY RNTNIKRCGC NACIKIHLTK DRACYEIYEF VEELSVIFWA DEVARINYKE  300
FGDVISFDGT FRTNKHAMIF VSFLAVDNHK ASVVVGSALI NGETIDNFTW VLNVFLKCHA  360
KQPVFVITDQ CSTMKQAIPK VFTESKHRLC MWHIMKKVPS KVSVALNHDP TFNKVINKLV  420
WNIHIGPSEF ESRWNEMIDK YNLAGDTWFT EMYEIRHSWI PAYYKDXPMS GLMKTTSRSE  480
SSNSYINIYE SYWFDLVQFL NNYDVAIEKQ RYRQFVHQTV TRTTNPKFVT PLRLESHASS  540
IYCRNVFFDI QKEIKKAVWF CAIETVECRD DFKSFMGRNY STNTVECDCN LFTRNGYLCR  600
HAFKVLINDE VECIPEKYVL RRWKRELVPV QIQSARVRYG EVNAEKEKSI IDVYSKIDDI  660
ISIESNDQSI LDRLGRNLDK FMVDIEKEVP YEDPSQQKLD AIRDHLGVSI PDEVDILPPS  720
GIRNKGCETG KRLLELDLSV LLESVVDAIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-49FAR1 family protein