PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024990286.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 325aa    MW: 35814.8 Da    PI: 5.0862
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024990286.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH505.2e-164594255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +h+  E+rRR++iN++f+ Lr+l+P++    ++K + a+ L +++eY+++Lq
  XP_024990286.1 45 RSKHSVTEQRRRSKINERFQILRDLIPNS----DQKRDTASFLLEVIEYVQYLQ 94
                    899*************************9....8*******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MKSSKGHQED EEEDYEDFGA KKDNTASSNT SKADGKSSDK ANATRSKHSV TEQRRRSKIN  60
ERFQILRDLI PNSDQKRDTA SFLLEVIEYV QYLQEKVHKY EGSYQGWNAE PTKLMPWRNS  120
HWRVPNFGQP PVLKSDSGQA PSFPVRFDEN VSVAPAVNTT TPQNPVSGDV NCNLMDSQPE  180
LLASKTTVMP MPMPMPMPMP MPLPIPVQAS MPVPIQQQLD GAFSHPTTLQ GSVCNVQSTD  240
GDANQQEELT VEGGTISISS VYSQGLLNSL TQALQNSGVD LSQATISVQV DLGKRANRGI  300
GKDEQEEFSN GDKSSSDQAQ KRLKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-95bHLH family protein