PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024990286.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 325aa MW: 35814.8 Da PI: 5.0862 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 50 | 5.2e-16 | 45 | 94 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+ E+rRR++iN++f+ Lr+l+P++ ++K + a+ L +++eY+++Lq XP_024990286.1 45 RSKHSVTEQRRRSKINERFQILRDLIPNS----DQKRDTASFLLEVIEYVQYLQ 94 899*************************9....8*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MKSSKGHQED EEEDYEDFGA KKDNTASSNT SKADGKSSDK ANATRSKHSV TEQRRRSKIN 60 ERFQILRDLI PNSDQKRDTA SFLLEVIEYV QYLQEKVHKY EGSYQGWNAE PTKLMPWRNS 120 HWRVPNFGQP PVLKSDSGQA PSFPVRFDEN VSVAPAVNTT TPQNPVSGDV NCNLMDSQPE 180 LLASKTTVMP MPMPMPMPMP MPLPIPVQAS MPVPIQQQLD GAFSHPTTLQ GSVCNVQSTD 240 GDANQQEELT VEGGTISISS VYSQGLLNSL TQALQNSGVD LSQATISVQV DLGKRANRGI 300 GKDEQEEFSN GDKSSSDQAQ KRLKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69010.1 | 2e-95 | bHLH family protein |