PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024990116.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

TALE

Protein Properties

Length: 324aa MW: 36546 Da PI: 5.3032

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024990116.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.6	1e-08	266	300	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp++ ++ LA+ +gL+ +q+ +WF N+R ++ XP_024990116.1 266 KWPYPTEGDKISLAETTGLDPKQINNWFINQRKRH 300 579*****************************885 PP
2	ELK	32.6	1.8e-11	220	240	1	21
ELK 1 ELKhqLlrKYsgyLgsLkqEF 21 ELK+ LlrK++g++gsLkqEF XP_024990116.1 220 ELKDTLLRKFGGRIGSLKQEF 240 9*******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MDEMYGFHST SGYTVSPENN LILPAEHQSS VDQYWPFYGS DDLLSVAASV ISDAVSIETN 60 PDRIILPRRR SNRPRDQAKN GGLDVAAADD ASGDRIKEKI ASHPSYSKLL AAYIDCQKVG 120 APPEIACLLD DIRLENDVRK RNATASTCLG IDPELDEFME TYCHVLVKYK SDLARPFDEA 180 AVFLGNIETQ LRNLCKDEVT ISSEEEFSGG ETDNAQMSQE LKDTLLRKFG GRIGSLKQEF 240 TKKKKKGKLP KEARQTLLEW WNSHYKWPYP TEGDKISLAE TTGLDPKQIN NWFINQRKRH 300 WKPPENMQLA VMGGGLPGQH FYDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-105	TALE family protein