PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024989833.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 336aa MW: 37924.1 Da PI: 9.7944 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.2 | 8.1e-18 | 30 | 77 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+ +++q+G g+W++ +++ g++R++k+c++rw +yl XP_024989833.1 30 KGPWTPEEDRKLLSYIQQYGHGSWRSLPAKAGLKRCGKSCRLRWTNYL 77 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.5 | 1.3e-17 | 83 | 127 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ eE+ +++++++lG++ W+tIa++++ +Rt++++k++w+++ XP_024989833.1 83 RGKFSLEEERTIIQLHALLGNR-WSTIAAHLP-RRTDNEIKNHWNSH 127 89********************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
MGRSGRSEKK KKQNNNSNSN MVGLGVGVKK GPWTPEEDRK LLSYIQQYGH GSWRSLPAKA 60 GLKRCGKSCR LRWTNYLRPD IKRGKFSLEE ERTIIQLHAL LGNRWSTIAA HLPRRTDNEI 120 KNHWNSHIKK RMTKMGIDPM THKPKSGTQL LGSNLNHMAQ WEAARLEAEA RLVQKPKYYP 180 NPPPYLISPS STQELHKAPT MVPPPYLPCL DVLKVWQGTL WSNYSINNES LQSLISTSNV 240 SENISLVTPT TMTEISHVES KSSCDQGVTT KHNDQVKTQM GPFEEFEYPN DATFIGADPL 300 RSPDFWEEFV DLLDGGWNSL TSNLAMIASP PASPVF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15310.1 | 7e-76 | MYB family protein |