PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024989509.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 171aa    MW: 19571.5 Da    PI: 9.8418
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024989509.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.92.8e-061440736
                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS CS
             HLH  7 erErrRRdriNsafeeLrellPkaskapsk 36
                    ++E+rRRd++++ +++L +ll  +   + +
  XP_024989509.1 14 AMEKRRRDHMKDLYSKLASLLHLQ---SYE 40
                    79******************9876...444 PP

Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MKRGGSSSLR PSAAMEKRRR DHMKDLYSKL ASLLHLQSYE RMPLLALLDQ ATITLKQWKE  60
RVERMTARKQ ELQNERISGE SSHEHKLQVV QVSEMDSSLE VNLIISKADN VRKVELFRVL  120
SIIQQSGAEI VSCSSSCLGH NQHCTIHAQA FHTRLGFDTS LIEYRLKQLI S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10586.11e-22bHLH family protein