PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024989155.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 285aa    MW: 32516.4 Da    PI: 4.7921
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024989155.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.8e-19122172255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd      k +r++lg+f taeeAa a+++a+++++g
  XP_024989155.1 122 RYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFKTAEEAALAYDKAALRIRG 172
                     8********.**********3...2234*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MAVEMELQTS PPEGILENVW ATFIGEDCQT SEEPTMKPYQ VSESWEELPN LDHGRDESMG  60
FLQRLPSLGR WISMGSEEWE EILDRIVLPS ENLENSCDQC LSKSGESTVS SSGANVVKVE  120
KRYRGVRRRP WGKYAAEIRD SSRKGARVWL GTFKTAEEAA LAYDKAALRI RGPKAHLNFP  180
IQVVEKAMGI THDPKCDTND PLTSSQRIDS THIHNLWARD YNTNKRVVRG WEELQEKDVA  240
MHGPPPLKRL DTLDGSYWDD NIDVLEFQDL GASYLENLLF RETKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.14e-37ERF family protein