PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024989139.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 88aa MW: 9966.24 Da PI: 8.5174 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 20.1 | 1.1e-06 | 21 | 55 | 20 | 54 |
HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 20 feeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++L++llP++ + +s K s + +L+++++Y++sL XP_024989139.1 21 VSKLQQLLPELRNRRSNKASASKVLQETCNYVRSL 55 589*******8789999999999**********99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 88 aa Download sequence |
MSSRRSGSTP RITDEQIIEL VSKLQQLLPE LRNRRSNKAS ASKVLQETCN YVRSLHKEVD 60 DLSDRLSQLL STIDDDSPQA SIIRSLIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28857.1 | 1e-28 | bHLH family protein |