PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024989073.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 392aa MW: 41135.5 Da PI: 9.1052

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024989073.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	68.2	1.3e-21	256	318	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae eeL kv++L++eN +Lk+e+++l+ ++a+lk ++ XP_024989073.1 256 ERELKRERRKQSNRESARRSRLRKQAEAEELGGKVEALTSENLTLKSEINRLTVNSANLKLQN 318 89**********************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MGNSEEAKDF KHDETSSPSL EQQQTGHVYP DWAAMQAYYG PRMAVPPYFS SAVASGHAPP 60 PYMWGPLQHM MPPYAAIYPH GGVYAHPGVT VAASPMHIDS PAKSSGNSDR GLVKKLKGFD 120 GLAMSIGNDN GGSAEGGNDN GISQSGETEG SSEGSDGNTT EGAKNGRKRS RGGSSTSSEV 180 GKTEQSDQLP STNANGGSKK VTGLAVAPGK VLGKTIGVVI SADSGTELEL KKSPAAANMT 240 SAAVTMIPST AILQNERELK RERRKQSNRE SARRSRLRKQ AEAEELGGKV EALTSENLTL 300 KSEINRLTVN SANLKLQNAK LLEKLKNTQH EEAREDPRPD KKGSSLSTAN LLSRVDNGSG 360 SVVRNDGEAT GSGATLRQLL DGNPRADAVA AG

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MGNSEEAKDF KHDETSSPSL EQQQTGHVYP DWAAMQAYYG PRMAVPPYFS SAVASGHAPP  60
PYMWGPLQHM MPPYAAIYPH GGVYAHPGVT VAASPMHIDS PAKSSGNSDR GLVKKLKGFD  120
GLAMSIGNDN GGSAEGGNDN GISQSGETEG SSEGSDGNTT EGAKNGRKRS RGGSSTSSEV  180
GKTEQSDQLP STNANGGSKK VTGLAVAPGK VLGKTIGVVI SADSGTELEL KKSPAAANMT  240
SAAVTMIPST AILQNERELK RERRKQSNRE SARRSRLRKQ AEAEELGGKV EALTSENLTL  300
KSEINRLTVN SANLKLQNAK LLEKLKNTQH EEAREDPRPD KKGSSLSTAN LLSRVDNGSG  360
SVVRNDGEAT GSGATLRQLL DGNPRADAVA AG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	166	172	GRKRSRG
2	273	279	RRSRLRK
3	273	280	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	2e-93	bZIP family protein