PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024988849.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 186aa MW: 21405.2 Da PI: 6.2504 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.2 | 2.2e-11 | 11 | 62 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+ +E++RR +++ +++L +l+P++ + + s + L++A +YIk+Lq XP_024988849.1 11 RVDRRTIEKNRRIHMKALYSQLHSLVPHD--SSREEISLPDQLQEAANYIKKLQ 62 566678**********************7..15566*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MECNRSSSSS RVDRRTIEKN RRIHMKALYS QLHSLVPHDS SREEISLPDQ LQEAANYIKK 60 LQIKLEKMNE EKDNLMGIKK LESIRDEKEI KSSNLSVGQQ RTPQIDVREI GSSLEAILIT 120 GVDFKFLFTE TIRVIHEEGF NVVNASFSIL NDTVFHTIHA QIGESYDQEN GVSRIIDRLN 180 CLVYDI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 4e-42 | bHLH family protein |