PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024988528.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family B3
Protein Properties Length: 379aa    MW: 42292.9 Da    PI: 4.5716
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024988528.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.71.2e-141198198
                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                    ffk+l   d ++s+ l lp  f+++h+++k+   tl++  + g sW++++  ++ +++y ++ GWk+ v++ +L  gDf+vFkl+++s+f   v+vf
  XP_024988528.1 11 FFKIL--LDPSASH-LPLPHAFVSKHKIPKNP--TLQIA-TGGYSWRLTI--ERIGKAYCFGHGWKNVVEDAQLGFGDFLVFKLVHQSTF--IVSVF 97
                    78888..6667777.99*********877533..67744.599*******..*********************************98888..99888 PP

                    - CS
              B3 98 r 98
                     
  XP_024988528.1 98 A 98
                    5 PP

2B349.66.9e-16204292896
                     -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                      + + +++l+lp +f+e  g+  ++s t+tl++++  +W++ ++ +k  ++  y l+ GW++F ++n+L egD +vFk+++++++  +vk+
  XP_024988528.1 204 ISKTHNNLLRLPSEFVELAGIG-NQS-TITLKNLDEHEWRLGIRSEKIARTarYHLSPGWQDFRRSNELSEGDECVFKYIKSEGKLSLVKI 292
                     56678899********655544.344.9***************8855444456***************************97666556666 PP

Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MADCSPPPPS FFKILLDPSA SHLPLPHAFV SKHKIPKNPT LQIATGGYSW RLTIERIGKA  60
YCFGHGWKNV VEDAQLGFGD FLVFKLVHQS TFIVSVFAPN GCERFLPSSK IKVEDDVDVD  120
VDVVDDDDDS NDGIVYEGGG DEDDDEEEEE EDNDDDDSEE EEEEEDDDDD SGSGGDGDGG  180
DDDDDDGDGG IDGDDGDPFF MTIISKTHNN LLRLPSEFVE LAGIGNQSTI TLKNLDEHEW  240
RLGIRSEKIA RTARYHLSPG WQDFRRSNEL SEGDECVFKY IKSEGKLSLV KITKKKPMAR  300
QSPVKIPATE VVKRKRGRPV VKVNAVARQP PAKTPAKKVV KRKRGRPFKN RRPVDVQSGD  360
DCVEVVQRRP SKKSRVIYF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1294316KKKPMARQSPVKIPATEVVKRKR
2313343KRKRGRPVVKVNAVARQPPAKTPAKKVVKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53310.18e-11B3 family protein