PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024988528.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 379aa MW: 42292.9 Da PI: 4.5716 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 45.7 | 1.2e-14 | 11 | 98 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ffk+l d ++s+ l lp f+++h+++k+ tl++ + g sW++++ ++ +++y ++ GWk+ v++ +L gDf+vFkl+++s+f v+vf XP_024988528.1 11 FFKIL--LDPSASH-LPLPHAFVSKHKIPKNP--TLQIA-TGGYSWRLTI--ERIGKAYCFGHGWKNVVEDAQLGFGDFLVFKLVHQSTF--IVSVF 97 78888..6667777.99*********877533..67744.599*******..*********************************98888..99888 PP - CS B3 98 r 98 XP_024988528.1 98 A 98 5 PP | |||||||
2 | B3 | 49.6 | 6.9e-16 | 204 | 292 | 8 | 96 |
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 + + +++l+lp +f+e g+ ++s t+tl++++ +W++ ++ +k ++ y l+ GW++F ++n+L egD +vFk+++++++ +vk+ XP_024988528.1 204 ISKTHNNLLRLPSEFVELAGIG-NQS-TITLKNLDEHEWRLGIRSEKIARTarYHLSPGWQDFRRSNELSEGDECVFKYIKSEGKLSLVKI 292 56678899********655544.344.9***************8855444456***************************97666556666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 379 aa Download sequence |
MADCSPPPPS FFKILLDPSA SHLPLPHAFV SKHKIPKNPT LQIATGGYSW RLTIERIGKA 60 YCFGHGWKNV VEDAQLGFGD FLVFKLVHQS TFIVSVFAPN GCERFLPSSK IKVEDDVDVD 120 VDVVDDDDDS NDGIVYEGGG DEDDDEEEEE EDNDDDDSEE EEEEEDDDDD SGSGGDGDGG 180 DDDDDDGDGG IDGDDGDPFF MTIISKTHNN LLRLPSEFVE LAGIGNQSTI TLKNLDEHEW 240 RLGIRSEKIA RTARYHLSPG WQDFRRSNEL SEGDECVFKY IKSEGKLSLV KITKKKPMAR 300 QSPVKIPATE VVKRKRGRPV VKVNAVARQP PAKTPAKKVV KRKRGRPFKN RRPVDVQSGD 360 DCVEVVQRRP SKKSRVIYF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 294 | 316 | KKKPMARQSPVKIPATEVVKRKR |
2 | 313 | 343 | KRKRGRPVVKVNAVARQPPAKTPAKKVVKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53310.1 | 8e-11 | B3 family protein |