PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024988446.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 201aa    MW: 22827.1 Da    PI: 7.6326
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024988446.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.46.3e-33122180159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg H h+
  XP_024988446.1 122 LDDGYRWRKYGQKAVKNNKFPRSYYRCTQPGCNVKKQVQRLSKDEGVVVTTYEGMHSHP 180
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MDNLDAIFHY SSSSTSPPAA VSSHLSLNMS NRYSLADHSN TNHYSSYDQS DDDHDLRLIG  60
ENENGVSDNI FVADHVSPTT NSFSNCDGSE LNTANKLNVK KGEKKIRKPK YAFQTRSQVD  120
ILDDGYRWRK YGQKAVKNNK FPRSYYRCTQ PGCNVKKQVQ RLSKDEGVVV TTYEGMHSHP  180
IEKSTDNFEH ILTQMQIYSS C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.11e-58WRKY family protein