PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024988410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | Trihelix | ||||||||
Protein Properties | Length: 312aa MW: 34858 Da PI: 5.358 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 86.2 | 4e-27 | 34 | 128 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+qe l+Li+++r e+r+rrg+ + +p+W++vs++++++g++r+p+qC+++w+nl++++kkike+e++ ++e++s + + ++l+ XP_024988410.1 34 RWTRQELLVLIQGKRVAENRVRRGRtavlafgssQVEPKWSSVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWESQIKEEAESFWLMRNDLR 128 8**********************866666666669*********************************************999999999988886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MALERLTLAP VLLDTADPLP NGAEDINKPP RLPRWTRQEL LVLIQGKRVA ENRVRRGRTA 60 VLAFGSSQVE PKWSSVSSYC KRHGVNRGPV QCRKRWSNLA GDFKKIKEWE SQIKEEAESF 120 WLMRNDLRRE RKLPGFFDRE VYDILDGGGP SSAAGDKSLV LSLAPSNDET ENEAVFDSGR 180 TAAADDGLFS DEVLGTPEKD TDAPTPTPTP TPISATTQDK SSIPNPEEAH EEGRKRKRPA 240 TDTDTNTNEV EMSIQNQLIE AMERNGRLLS SQLEIQNTNS QLDREQRKDH ANSLFAVLNK 300 LADAMVRIAD KL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 1e-110 | Trihelix family protein |