PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024988301.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | G2-like | ||||||||
Protein Properties | Length: 308aa MW: 34582.7 Da PI: 6.4409 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 102.5 | 2.7e-32 | 20 | 74 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLH+rFv+ v+qLGG+ekAtPk+++++m+++gLtl+h+kSHLQkYRl XP_024988301.1 20 KPRLKWTPELHQRFVDSVTQLGGPEKATPKSLMRVMGIHGLTLYHLKSHLQKYRL 74 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 61.4 | 1.9e-19 | 22 | 73 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e+++++vd v+qlGg+ t+k+ +r mg g+tl+++ks++qky+ XP_024988301.1 22 RLKWTPELHQRFVDSVTQLGGPekaTPKSLMRVMGiHGLTLYHLKSHLQKYR 73 89*************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence |
MAHQNIQNQD LNLVLSSDAK PRLKWTPELH QRFVDSVTQL GGPEKATPKS LMRVMGIHGL 60 TLYHLKSHLQ KYRLGKIQQS PACSGNMQEE FADDHRSDIT SIDHNDETPN QINESLKIAQ 120 ALQMQMEVQR KLHEQIEVQR HLQLRIEAQG KYLQSVLRKA QDTLAGYNSS AIEVEAAKAE 180 LSHLVSMVDN GCPNSLSVLT ELDDSTLKKE VEKNPKALTI GSSLESSLTS SESSGRREND 240 DHVVLSLMEM NPPAKNGRKR SGSTISDGNC EGKRLQKDSK RFDLNSQYVN DFDFDFESRS 300 NTLDLNSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69580.1 | 6e-76 | G2-like family protein |