PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024988247.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family BES1
Protein Properties Length: 303aa    MW: 32606.5 Da    PI: 7.9046
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024988247.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822200.74.5e-6231482149
          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasaspessl 94 
                     ++ r ptwkErEnnkrRERrRRaiaaki+aGLR +Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp    ++e++g sa+ sp+ss+
  XP_024988247.1   3 SGSRLPTWKERENNKRRERRRRAIAAKIFAGLRVYGNYKLPKHCDNNEVLKALCNEAGWIVEEDGTTYRKGCKPVevVRMESMGGSATGSPCSST 97 
                     789************************************************************************8899***************7 PP

          DUF822  95 qsslkssalaspvesysaspksssfpspssld...sislasaasllpvlsvlslvsss 149
                             ++sp  sy+ sp+sss+ps+s+++   s+ + +++sl+p+l++ls++ ss
  XP_024988247.1  98 Y-------QPSPNGSYNFSPTSSSIPSSSTSSlyaSNIIPDPNSLIPWLKNLSSSGSS 148
                     6.......8*****************9987651114455566*********9985443 PP

Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MTSGSRLPTW KERENNKRRE RRRRAIAAKI FAGLRVYGNY KLPKHCDNNE VLKALCNEAG  60
WIVEEDGTTY RKGCKPVEVV RMESMGGSAT GSPCSSTYQP SPNGSYNFSP TSSSIPSSST  120
SSLYASNIIP DPNSLIPWLK NLSSSGSSSS KFPHHLYMGG SSISAPVTPP LSSPTCGTPR  180
LMDDQISKGQ HYPFLPTSYC CSTPHSPGLQ TPAADSGWVT PQEGASSPTF SLQVASLGLK  240
PCSPADQKQT ADVAMSDACH EFAFGGSSSM NMKGLVKAWE GERIHEECIS DDLELTLGNP  300
TTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.14e-80BES1 family protein