PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024988247.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | BES1 | ||||||||
Protein Properties | Length: 303aa MW: 32606.5 Da PI: 7.9046 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 200.7 | 4.5e-62 | 3 | 148 | 2 | 149 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasaspessl 94 ++ r ptwkErEnnkrRERrRRaiaaki+aGLR +Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp ++e++g sa+ sp+ss+ XP_024988247.1 3 SGSRLPTWKERENNKRRERRRRAIAAKIFAGLRVYGNYKLPKHCDNNEVLKALCNEAGWIVEEDGTTYRKGCKPVevVRMESMGGSATGSPCSST 97 789************************************************************************8899***************7 PP DUF822 95 qsslkssalaspvesysaspksssfpspssld...sislasaasllpvlsvlslvsss 149 ++sp sy+ sp+sss+ps+s+++ s+ + +++sl+p+l++ls++ ss XP_024988247.1 98 Y-------QPSPNGSYNFSPTSSSIPSSSTSSlyaSNIIPDPNSLIPWLKNLSSSGSS 148 6.......8*****************9987651114455566*********9985443 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MTSGSRLPTW KERENNKRRE RRRRAIAAKI FAGLRVYGNY KLPKHCDNNE VLKALCNEAG 60 WIVEEDGTTY RKGCKPVEVV RMESMGGSAT GSPCSSTYQP SPNGSYNFSP TSSSIPSSST 120 SSLYASNIIP DPNSLIPWLK NLSSSGSSSS KFPHHLYMGG SSISAPVTPP LSSPTCGTPR 180 LMDDQISKGQ HYPFLPTSYC CSTPHSPGLQ TPAADSGWVT PQEGASSPTF SLQVASLGLK 240 PCSPADQKQT ADVAMSDACH EFAFGGSSSM NMKGLVKAWE GERIHEECIS DDLELTLGNP 300 TTR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 4e-80 | BES1 family protein |