PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024988220.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family FAR1
Protein Properties Length: 285aa    MW: 32689.2 Da    PI: 8.7626
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024988220.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.37.8e-1651147190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek..dgkwevtkleleHnH 87 
                     ++Y++YA  +GF++r s++k++ + g ++ +  vC k+gk+++++ +      ++++ r+++ + t+Cka+++ k  +  ++ ++++ +  +HnH
  XP_024988220.1  51 EMYRRYADIAGFDIRLSTQKTR-KGGIVKLKYVVCHKHGKPKKRSVDsvevdgHRRQVRNTNFKVTDCKASVRFKYIEgsQSSYRLYYFCPNHNH 144
                     58**************987665.78878888889**********9999999988888899999*************999899************* PP

            FAR1  88 ela 90 
                     +l 
  XP_024988220.1 145 DLI 147
                     995 PP

Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MDDLNVVDHF VLPAQGVIGS PCCDGVCIPY VPSEFQPVVG SIFASLEDGI EMYRRYADIA  60
GFDIRLSTQK TRKGGIVKLK YVVCHKHGKP KKRSVDSVEV DGHRRQVRNT NFKVTDCKAS  120
VRFKYIEGSQ SSYRLYYFCP NHNHDLIDDA DRILSRKSRQ VSYDDKVMVH RSAMSNIGPV  180
RAHKLQVCLK GGYDEVGSTV VDYKNFKRDL NNYIGDGDVQ MVVNMLNDRR QYGTNFVFEY  240
KIDNGRLVSM FWANELTRLN YAEFGDVMSF DATYRFNKYV NVMLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-20FAR1 family protein