PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024987947.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 524aa    MW: 58773.1 Da    PI: 7.0982
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024987947.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.3e-13376422455
                     HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     +h e+Er+RR+++N++f  Lr ++P+ +      K++Ka+ L  A+ YI +Lq
  XP_024987947.1 376 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITDLQ 422
                     799***********************66......*****************99 PP

Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    
MKTEVNMGGE SWNDEDKAIV AAVLGSRAFD YLISSSVSNE CSLTSLGNDE NLQHKLSDLV  60
DHPNSANFSW NYAIFWQVSQ SKTGDLVLGW GDGSCREPKE GEEFEIARIL SFRLEDENQQ  120
RIKKRVLQKI HLLFGGLDED NYAFGLDRVT DTEMFFLISM YFSFRKGDGG PGRCFTSGHH  180
VWISDALNSS SDYCFRSYLA KSAGIQTIVL VPTDVGVVEV GSIRSLPENP KLLHSIRSSF  240
SVNQITASVA TPIPVIKRNS NSHSDRPVRA SKIFGQDLSS NLNQPPFREK LTVRKPDDPR  300
VPFSNWAQFN SPPKPTPQLQ IDFSGITSRP VSSESKISEE TSCRDEREAI TGIITDEKRP  360
RKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYALRAVVP NISKMDKASL LGDAITYITD  420
LQKKLKEMES ERNGPNNNNS IEVQTGEDEV LVKVTCPLDI HPVSKVIQTF QESKITVMES  480
KMAARNDTVF HTFVVKSQGP EQLTKEKLIS AFSRETTSSL HPSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1358366KRPRKRGRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01260.10.0bHLH family protein