PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024987947.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 524aa MW: 58773.1 Da PI: 7.0982 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.6 | 9.3e-13 | 376 | 422 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq XP_024987947.1 376 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITDLQ 422 799***********************66......*****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 524 aa Download sequence |
MKTEVNMGGE SWNDEDKAIV AAVLGSRAFD YLISSSVSNE CSLTSLGNDE NLQHKLSDLV 60 DHPNSANFSW NYAIFWQVSQ SKTGDLVLGW GDGSCREPKE GEEFEIARIL SFRLEDENQQ 120 RIKKRVLQKI HLLFGGLDED NYAFGLDRVT DTEMFFLISM YFSFRKGDGG PGRCFTSGHH 180 VWISDALNSS SDYCFRSYLA KSAGIQTIVL VPTDVGVVEV GSIRSLPENP KLLHSIRSSF 240 SVNQITASVA TPIPVIKRNS NSHSDRPVRA SKIFGQDLSS NLNQPPFREK LTVRKPDDPR 300 VPFSNWAQFN SPPKPTPQLQ IDFSGITSRP VSSESKISEE TSCRDEREAI TGIITDEKRP 360 RKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYALRAVVP NISKMDKASL LGDAITYITD 420 LQKKLKEMES ERNGPNNNNS IEVQTGEDEV LVKVTCPLDI HPVSKVIQTF QESKITVMES 480 KMAARNDTVF HTFVVKSQGP EQLTKEKLIS AFSRETTSSL HPSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 358 | 366 | KRPRKRGRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01260.1 | 0.0 | bHLH family protein |