PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024987871.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

TALE

Protein Properties

Length: 329aa MW: 37495.7 Da PI: 4.9676

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024987871.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28	3.7e-09	271	305	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp+++++ LA+++gL+++q+ +WF N+R ++ XP_024987871.1 271 KWPYPTEADKIALAESTGLDQKQINNWFINQRKRH 305 569*****************************885 PP
2	ELK	34.1	5.7e-12	225	246	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK+ LlrK++g+++sL++EFs XP_024987871.1 225 ELKDTLLRKFGGHISSLRHEFS 246 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MEEMYGFNSM SDYTISPETN LISSSEYHGV TSTSVDHYRT FYGSDNLLSA AASVISEAVS 60 LAATPHQILL PRTRSSRQRD QNKNDSDHHH VDVCDDIIKA KIASHPLYPK LLDAFIDCQK 120 LGAPPEIASL LDEIRRENDV RLRNAASSTC LVADPELDEF METYCQVLVK YKSDLARPFD 180 EATVFLNNIE TQLSNLCKDD GTVSSEEEFS GGETENTQVS REEQELKDTL LRKFGGHISS 240 LRHEFSKKKK KGKLPNEARQ TLLEWWDSHY KWPYPTEADK IALAESTGLD QKQINNWFIN 300 QRKRHWKPSE NMQLAIMGSF SGNQDFYDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-105	TALE family protein