PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024987133.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NF-YA | ||||||||
Protein Properties | Length: 262aa MW: 29007.5 Da PI: 9.5976 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 102.3 | 4.4e-32 | 107 | 163 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e ekkl +k rkpylheSRh+hA+rR R+sgGrF XP_024987133.1 107 QEPVYVNAKQYHAILRRRQSRAKAELEKKL-IKDRKPYLHESRHQHAMRRVRSSGGRF 163 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MARLRGVMSD ILSTPVLYPY ICYISDSYGQ GQQNFQHGAP NILPRNEETV AQAPQPELVG 60 HSVACASNPY YDPYYGGMMA AYSQHLVHPQ FLDMHQVRMP LPLEMAQEPV YVNAKQYHAI 120 LRRRQSRAKA ELEKKLIKDR KPYLHESRHQ HAMRRVRSSG GRFAKKTETN ASEDKKATGS 180 GASGMKRMQS GQSGESFSET RGGVVNSCNG RTYAVDGGGR YDNQDGFQGS SYHSDIGEGG 240 SLGQQWATMP ANQGSQRAVA MK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20910.1 | 2e-58 | NF-YA family protein |