PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024986983.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

TALE

Protein Properties

Length: 715aa MW: 79732.5 Da PI: 7.3127

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024986983.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.2	1.6e-09	537	569	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yps +++ LA+++gLt +qV++WF N R + XP_024986983.1 537 HPYPSDADKHMLATQTGLTRNQVSNWFINARVR 569 89*****************************87 PP
2	BELL	107.8	6.8e-35	386	455	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e ++kkakLl ++eeV++rY+qy++q+q+vissFe+vagl sa+pY+slAlka+SrhF c+k ai+eq+ XP_024986983.1 386 PEFHQKKAKLLYMQEEVCRRYRQYHQQMQMVISSFETVAGLSSATPYVSLALKAVSRHFHCVKCAISEQL 455 5889****************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 715 aa Download sequence
MEMNNLRTES HVAQKSRRHK LRFQHNSDDP NHQHLSQDPH FELHRPARYG SISYDPSVFP 60 SEMLNSIASN PHLLLPPSHA FLSHDQDSAT GSSPASFPHS VSCKVIADNP QNGGNWKSVV 120 SSSQSQLQVN SDSWNVVSYS NGGASSKPTY GYNQDLQNIH LGDQKNYGEV PAFGSTPYYH 180 NTLQEVVTSA TVGTHVHQSK NFLEISQSIP CWMNTSDQLG FIANRNNDHR EGTMMGATNE 240 NNCITQGLSL SLSSVPQPKT EFPNIHSGPK AALKTDLLAN SDSKQLMGMS SFAHRNVGPL 300 GPFTGYATIL KNSKYLKPAQ ELLNDNCDVG GHELVQSCDN THKILDEEMS RVSGESGTSG 360 ASSSTIYGSN EHITGRSSSL PESYRPEFHQ KKAKLLYMQE EVCRRYRQYH QQMQMVISSF 420 ETVAGLSSAT PYVSLALKAV SRHFHCVKCA ISEQLTQMKK TFEDLCSPTV GASSSKNFDA 480 NSTDTLSQLK SMDHNYQRQG KSGGFFGNQQ PVWRPQRGLP ERAVSVLKAW LFDHFLHPYP 540 SDADKHMLAT QTGLTRNQVS NWFINARVRI WKPMVEEIHT LETKGLADSN TNNPTPTDGQ 600 DTSRMDMSSL SNKQQPECSR TSGTLTMMNG QNEPNEQLWD HEKRSRPEYQ IPPATMDRSF 660 TSIIPYPRTT FEAGVGPVSL TLGLRQNAEH VQQLQQHEHQ LRQRFGGQLI HDFVG

Sequence ? help Back to Top

Protein Sequence Length: 715 aa Download sequence

MEMNNLRTES HVAQKSRRHK LRFQHNSDDP NHQHLSQDPH FELHRPARYG SISYDPSVFP  60
SEMLNSIASN PHLLLPPSHA FLSHDQDSAT GSSPASFPHS VSCKVIADNP QNGGNWKSVV  120
SSSQSQLQVN SDSWNVVSYS NGGASSKPTY GYNQDLQNIH LGDQKNYGEV PAFGSTPYYH  180
NTLQEVVTSA TVGTHVHQSK NFLEISQSIP CWMNTSDQLG FIANRNNDHR EGTMMGATNE  240
NNCITQGLSL SLSSVPQPKT EFPNIHSGPK AALKTDLLAN SDSKQLMGMS SFAHRNVGPL  300
GPFTGYATIL KNSKYLKPAQ ELLNDNCDVG GHELVQSCDN THKILDEEMS RVSGESGTSG  360
ASSSTIYGSN EHITGRSSSL PESYRPEFHQ KKAKLLYMQE EVCRRYRQYH QQMQMVISSF  420
ETVAGLSSAT PYVSLALKAV SRHFHCVKCA ISEQLTQMKK TFEDLCSPTV GASSSKNFDA  480
NSTDTLSQLK SMDHNYQRQG KSGGFFGNQQ PVWRPQRGLP ERAVSVLKAW LFDHFLHPYP  540
SDADKHMLAT QTGLTRNQVS NWFINARVRI WKPMVEEIHT LETKGLADSN TNNPTPTDGQ  600
DTSRMDMSSL SNKQQPECSR TSGTLTMMNG QNEPNEQLWD HEKRSRPEYQ IPPATMDRSF  660
TSIIPYPRTT FEAGVGPVSL TLGLRQNAEH VQQLQQHEHQ LRQRFGGQLI HDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	6e-83	TALE family protein