PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024986931.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NF-YB | ||||||||
Protein Properties | Length: 139aa MW: 15745.5 Da PI: 4.5611 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 168.6 | 7.3e-53 | 17 | 112 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 ++q+r+lPianv+rimk++lP+nakisk+aket+qec+sefisfvt+eas+kc++e+rkt+ngdd++wa++tlGf+dy+ plk yl +yre+e + XP_024986931.1 17 NQQERLLPIANVGRIMKQILPQNAKISKEAKETMQECASEFISFVTGEASEKCKKERRKTVNGDDVCWAMGTLGFDDYAPPLKRYLDRYREVEDD 111 579******************************************************************************************98 PP NF-YB 97 k 97 + XP_024986931.1 112 R 112 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MDDSTTRFTT GEDETANQQE RLLPIANVGR IMKQILPQNA KISKEAKETM QECASEFISF 60 VTGEASEKCK KERRKTVNGD DVCWAMGTLG FDDYAPPLKR YLDRYREVED DRLATPQRNE 120 EEGQPSSSAA EFSSIPKPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 2e-55 | NF-YB family protein |