PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024986623.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 366aa MW: 41623.6 Da PI: 6.7099 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.9 | 7.2e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+d ++++G+g +W + +++ g++R++k+c++rw++yl XP_024986623.1 14 KGPWSPEEDAKLKDFIEKFGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 38.2 | 3.3e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ +Ed ++ + + G++ W+ Ia+ ++ gRt++++k++w++ XP_024986623.1 69 GEFSDDEDRIICSLYATIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111 789******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence |
MGRAPCCDKA SVKKGPWSPE EDAKLKDFIE KFGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIRHGE FSDDEDRIIC SLYATIGSRW SVIAAQLPGR TDNDIKNYWN TKLKKKLLTM 120 LPSLQEKPTL FPSMPFQPPY DDHHHHTSDH FLTTSSSFYT NYTPNFMSVD TTSNSLLVQD 180 NDHVNVANLS SPPPPPPPEN HLISLLGNNT IDVNENSYNS YLGFQDDHQS MCNSPMQECY 240 HPVSAMKEGM LMFGGGATCS SSEGGSCMSQ ISHGNYNKDH HQKQQYQIKQ EDQITLQEQV 300 LGDQTQSLQG FIINQKPKEY MIKNHVSPLN NDLEEVKQLN FNSYMFHDGD ESKTTHYQKG 360 MCSYYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 9e-72 | MYB family protein |