PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024986563.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 257aa MW: 29297.2 Da PI: 8.6011 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.9 | 1.5e-12 | 84 | 136 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r h e+ErrRR+++ + + Lr+llP ++ +++ s +e ++v+YIk+L+ XP_024986563.1 84 KRLEHREIERRRRQEMANLCSSLRSLLPLDF--IKGRRSTSEHMNQVVNYIKHLE 136 7999*************************75..********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MFSSFEHSRE VSFQIPSTTQ QQQDHHNRLT SVTALRRLPT GPFDDHKLVP SQQKPGRKRS 60 CNNLQQQDHH LVVDCDDENE KKKKRLEHRE IERRRRQEMA NLCSSLRSLL PLDFIKGRRS 120 TSEHMNQVVN YIKHLEENIK GLETTRDELK KTCPHVTDSS SVLPNKNIEN ETSGRHGPNT 180 VTVGCSHGGV EILIKSCTGF PISRVVKALV QEGLNVISCN STKVNERFIH SIHSEVSDEI 240 CIQVSILQKK LVELVLS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 81 | 96 | KKKKRLEHREIERRRR |
2 | 82 | 97 | KKKKRLEHREIERRRR |
3 | 83 | 98 | KKKKRLEHREIERRRR |
4 | 85 | 96 | RLEHREIERRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25410.1 | 1e-29 | bHLH family protein |