PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024986469.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 375aa MW: 42602.9 Da PI: 9.1629 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 36.4 | 9.2e-12 | 4 | 68 | 17 | 88 |
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 ++pk f+++ ++ ++ + + + g++W vk+ ++ v+++GW+ Fv+ ng+++ Dfv Fk++g+ XP_024986469.1 4 SIPKAFTKHLKSR--RNNKTAILKRGGQKWPVKI-----VDHWVFGEGWETFVRGNGVQDFDFVFFKHEGDL 68 8*****9555544..4456666778*********.....45579***********************98863 PP | |||||||
2 | B3 | 60.1 | 3.8e-19 | 160 | 248 | 4 | 98 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +l +++++++ l+lpk fa ++g+++ +++l++ e+ sW+v++ +++ g+ ++ GW+eF+ angL++gD++ F+l++ +++++v + XP_024986469.1 160 TL--KSATSKHKLYLPKAFALSNGLING---EIILKNvENEGSWKVNM--TNYCGEvFYVHHGWREFCIANGLEQGDSFQFELIK-KGEKPVANI 246 55..56777788***********99943...6*****8888*******..888888899************************98.777788777 PP E- CS B3 97 fr 98 r XP_024986469.1 247 SR 248 65 PP | |||||||
3 | B3 | 43.7 | 5.1e-14 | 264 | 353 | 2 | 96 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 fk + ++++ k++++ +p +fa+++g++k++ +++++de+ r W kl + k++r+ ++ G +e+ angLkegD ++F+l++ ++ ++++ + XP_024986469.1 264 FKSTATPYSIKNSLVNIPSDFARSNGLDKRN-CEMIVMDEKRRLWPTKL--CCKDNRVRIK-GSREMQIANGLKEGDEFLFELVD-KGNKPLMNF 353 688899********************99866.59***************..7777787777.********************997.666666655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence |
MLQSIPKAFT KHLKSRRNNK TAILKRGGQK WPVKIVDHWV FGEGWETFVR GNGVQDFDFV 60 FFKHEGDLVF DTIVFNASCC ERDYPSNKVT IIEAEKACPE AKSLRNCIID TSGSETGNKL 120 IRCHSEADGS NLIDISMKSL LKAEGTRIPD QNHHPCFIRT LKSATSKHKL YLPKAFALSN 180 GLINGEIILK NVENEGSWKV NMTNYCGEVF YVHHGWREFC IANGLEQGDS FQFELIKKGE 240 KPVANISRIS KKTPMVNAAH NPCFKSTATP YSIKNSLVNI PSDFARSNGL DKRNCEMIVM 300 DEKRRLWPTK LCCKDNRVRI KGSREMQIAN GLKEGDEFLF ELVDKGNKPL MNFHNNQHTP 360 EMGKKLELQF EKSAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24700.1 | 1e-40 | B3 family protein |