PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024986312.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 259aa MW: 30170.2 Da PI: 7.7923 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 164.1 | 4.9e-51 | 36 | 161 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 GfrFhPtdeel+ +yLk+k+eg ++el evi+ v++yk++Pw+Lp k + +++ ew+fF++rd+ky++g+r+nrat++gyWkatg+d++v+s XP_024986312.1 36 LGFRFHPTDEELIGYYLKRKIEGLEIEL-EVIPVVKLYKFDPWELPeKsFLPKQDMEWFFFCPRDRKYPNGSRTNRATNAGYWKATGNDRKVVS- 128 6***************************.99**************95344555788**************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 k+++ g +ktLvfy+grap g +t W+mheyrl XP_024986312.1 129 KSSVLGYRKTLVFYRGRAPFGDRTAWLMHEYRL 161 9999***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MLVLNNGKLF AILEKKFCVA KSFYFWIFQI FSRYSLGFRF HPTDEELIGY YLKRKIEGLE 60 IELEVIPVVK LYKFDPWELP EKSFLPKQDM EWFFFCPRDR KYPNGSRTNR ATNAGYWKAT 120 GNDRKVVSKS SVLGYRKTLV FYRGRAPFGD RTAWLMHEYR LCDDVSHGTP SFQEQTGGQE 180 GRSGCVKQNK FPKPTIPRQP HDQFGISPSS SYSNFTEEDD LIRFGCMSPY SGDESLMGFF 240 GIEDPTSYEP CDWTNSLEI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17980.1 | 1e-78 | NAC family protein |