PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024986281.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 408aa MW: 45540.2 Da PI: 6.4168 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.5 | 1e-12 | 342 | 387 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L +Av+YIk+Lq XP_024986281.1 342 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVDYIKDLQ 387 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 408 aa Download sequence |
MDSDLHHHHQ QQQQLHQPQQ IMNSGLTRYR SAPSSYFSNL INSGIYGDDS DPFFNPRVSN 60 AETDQILSRF TSPGAAADST SHQIMNQIAG YEPQFMDSVK QEQEGIYSEP QQQQQQTMLY 120 QNQFQSQTDH DNPPVATCSS ILDDSLPSMN LPTNLLRQSS SPAGFFAHLD IDNGYSVMRS 180 MDDFGAGRAS VPDSLLSSTK RLKSELGFSS GSHSSSGILP RIPENDSKIM GVKSSRNDGG 240 FGETHSQDEG YVARFQSGSW DDSDILSDSF LKELGENDHK LSNLNSSRNQ QNHGGRTRAP 300 STLVHHMSLP TSTAELDKLL QFQDSVPLKS RAKRGCATHP RSIAERVRRT RISERMRKLQ 360 ELVPNMDKQT NTADMLDLAV DYIKDLQKEA ETLSDHHAKC TCPHKQKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42280.1 | 1e-56 | bHLH family protein |