PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024986192.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family GRF
Protein Properties Length: 347aa    MW: 38568.7 Da    PI: 8.4438
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024986192.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC73.42.5e-2383127145
             WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                     d+epgrCrRtDGKkWRCs++++  +k+CErH+hrgr+rsrk++e+
  XP_024986192.1  83 DPEPGRCRRTDGKKWRCSKDAYHESKYCERHMHRGRNRSRKPVES 127
                     79****************************************986 PP

2QLQ64.62.5e-222156237
             QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
                    +FTa Q+q+L++Q+l+yKyL+a++PvP++L+++i++
  XP_024986192.1 21 PFTAVQWQELEHQALIYKYLVAGVPVPSDLVMPIRR 56
                    9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MSGSKSVAVS GGGGGDGYRA PFTAVQWQEL EHQALIYKYL VAGVPVPSDL VMPIRRSFEA  60
LSARLFHHPT SVGYCSYYGK KFDPEPGRCR RTDGKKWRCS KDAYHESKYC ERHMHRGRNR  120
SRKPVESQST SQSLSTAMSN IGTVNSTGSV KRSFQNVSNA SSPSQSLYPI TNSESFDFGS  180
NASETQVDTS SYVINNKDLR YAQGLTVNLD DHNYTSGVPE NARGLGMDIN IDGSRRLMPS  240
QLSTNSLLKP QNDSYLQSNS LQLNMTNTFD PLVDTTSMSK QRQQHPFFGS EIGSPGGQVK  300
HEQSMRQFFD EWPKAKEPWS NLDATTQLSM SMDPEFNARN PCPPNDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.11e-45GRF family protein