PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024986158.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family S1Fa-like
Protein Properties Length: 76aa    MW: 8343.01 Da    PI: 10.608
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024986158.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA136.36.8e-431076470
            S1FA  4 akveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
                    + ve kG+nPGlivllvvggll++flvgny+ly+yaqk+lPPrkkkPvskkklkreklkqGvavPGe
  XP_024986158.1 10 KDVEGKGINPGLIVLLVVGGLLITFLVGNYVLYMYAQKTLPPRKKKPVSKKKLKREKLKQGVAVPGE 76
                    6799**************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    
MDSESQFASK DVEGKGINPG LIVLLVVGGL LITFLVGNYV LYMYAQKTLP PRKKKPVSKK  60
KLKREKLKQG VAVPGE