PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_024985840.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 451aa MW: 50321.6 Da PI: 6.5427 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 22.6 | 1.9e-07 | 397 | 430 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + XP_024985840.1 397 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 430 569*****************************87 PP | |||||||
2 | ELK | 28.7 | 3e-10 | 351 | 372 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ XP_024985840.1 351 ELKHELKQGYKEKIVDIREEIL 372 9*******************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 451 aa Download sequence |
MAFHPNHLSQ EMALQQHFSD TDNNSVLRTI LPDHHHHHLA VAAQSSPSSR SVGKDHWLNS 60 AILRQQNQYG AGAADGGNNF LNLQTNNNSE SAITTSSQLH HQQHTGNNNN QWLSRSMMQR 120 NVSDVRGDDI VSQVSNDSII AAMSSHDSPD LNNQSRSVVA SQVDNNGGES EVGGGEGALV 180 NWQNARHKAE VLSHPLYEQL LSAHVACLRI ATPVDQLPRI DAQLAQSQHV VSKYSALGGH 240 ANLGDDKELD QFMTHYVLLL CSFKEQLQQH VRVHAMEAVM ACWEIEQSLQ SLTGVSPGEG 300 TGATMSDDDE DQVESDANLF DGSLDGHDSM GFGPLVPTES ERSLMERVRQ ELKHELKQGY 360 KEKIVDIREE ILRKRRAGKL PGDTTSVLKS WWQSHAKWPY PTEEDKARLV QETGLQLKQI 420 NNWFINQRKR NWHTNPSSSS SSTVLKTKRK R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G25220.2 | 0.0 | TALE family protein |