PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024985565.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 197aa MW: 22346.4 Da PI: 8.8291 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53 | 7.7e-17 | 7 | 54 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEdell ++k+ G g+W+t + + g+ R++k+c++rw +yl XP_024985565.1 7 KGPWTPEEDELLSTYIKKEGEGRWRTLPDKAGLLRCGKSCRLRWMNYL 54 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.4 | 1.1e-15 | 60 | 104 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +++E++l+++++++lG++ W++Ia +++ gRt++++k++w++ XP_024985565.1 60 RGHISPDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNDIKNYWNTC 104 67779*****************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MRGMKKKGPW TPEEDELLST YIKKEGEGRW RTLPDKAGLL RCGKSCRLRW MNYLRPSLKR 60 GHISPDEEDL ILRLHRLLGN RWSLIAGRIP GRTDNDIKNY WNTCLSKKLI SRGIDPRTHK 120 PLSSSLAPDR KNICLSSPEE ISPENRSSSS TANDQICSPD DAFSSFLDSL INEEMCSEIT 180 AARPADASKN QHVVLEN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 4e-72 | MYB family protein |