PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_024985554.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 213aa MW: 24279.1 Da PI: 5.0409 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64 | 3.2e-20 | 80 | 130 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp+ ng +r++lg+f+ta +Aaka+++a+ +++g XP_024985554.1 80 HYRGVRRRP-WGKYAAEIRDPKRNG--ARVWLGTFDTAIGAAKAYDRAAFEMRG 130 6********.**********98776..*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 213 aa Download sequence |
MATLDEVSAL QFIRHHLLDE YDNDTPDCPV FTSQTSISHH FESDFVIQFT VPESVDSRSG 60 KPHLEVDLKE TECVEEVEVH YRGVRRRPWG KYAAEIRDPK RNGARVWLGT FDTAIGAAKA 120 YDRAAFEMRG RKAILNFPLE IGSETVSCRK RSRDVEETVV VKKERITETG DEPSSWTAVW 180 DDDWCFSNIH PLSQLTVIRD QSRESGSILS TSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G61600.1 | 3e-41 | ERF family protein |