PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024985309.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 276aa    MW: 30620.2 Da    PI: 8.4486
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024985309.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.2e-184090155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s++ GVr+++ +g+WvAeI+  +   ++ r +lg+f+taeeAa+a+++a+  l+g
  XP_024985309.1 40 SKFVGVRQRP-SGKWVAEIKNTT---QKIRMWLGTFDTAEEAARAYDEAAYLLRG 90
                    79********.7******99932...36**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MELNFQNNYG FSSSSSSSSS PSLAKKGRFR KTNGRNSNRS KFVGVRQRPS GKWVAEIKNT  60
TQKIRMWLGT FDTAEEAARA YDEAAYLLRG ANARTNFIHH VPINSALSLK IRNLLNHKKY  120
LRQNSIAQNT TIKTQTTSPE PHGRPPLTCT VQVNNGKNET FSSGYQGIEV FNDGYKPDLS  180
NCIGGVEIGG SSCYELESDP PLLNIGGGFE GFDLGSISKK GEDDFERMKV ERQISASLYA  240
MNGVNEYWEN VLHDCSDGGG SYWDLPMLSQ MFCPIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-42ERF family protein