PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024984814.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

TALE

Protein Properties

Length: 292aa MW: 33441.8 Da PI: 6.7631

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024984814.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.3	2.2e-07	245	278	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++ +L +++gL+ +q+ +WF N+R + XP_024984814.1 245 KWPYPTEDDKVKLVEETGLQLKQINNWFINQRKR 278 458*****************************87 PP
2	ELK	25.1	3.9e-09	199	220	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ XP_024984814.1 199 ELKIELKQGFRSKIEDVREEIL 220 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MIINMQHQGL STVGTGGGFS DMVVSLSADQ HRQMKVEIAN HPLYQQLLSA HVGCLRVATP 60 IDQLPLIDSQ LSHANHLLLS YISDHHHHHH QPLSPEDRRD LDSFLAQYLV VLCAFKDRLQ 120 HHVRVDAVEA VMACREIEHN LQAITGVTLG EGTGGTMSDD EEDEMTMNFP LDQSGDVLGF 180 GPLHPTESER TLMDRVRQEL KIELKQGFRS KIEDVREEIL RKRRAGKLPG DTTSVLKDWW 240 QQHSKWPYPT EDDKVKLVEE TGLQLKQINN WFINQRKRNW NTNSNSNSKR KR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	276	292	RKRNWNTNSNSNSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-124	TALE family protein