PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024984375.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | Trihelix | ||||||||
Protein Properties | Length: 310aa MW: 35431.2 Da PI: 9.6625 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 63.5 | 4.9e-20 | 29 | 120 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr..tsessstcpyfdqle 86 +W+++e+ aLi+a+r+++ +lrrg+l++ +W+ev++ m +s++qC++k+e+l+kry+ + ++ ++ + s++++f++++ XP_024984375.1 29 CWSDEETVALIDAYRDKWYSLRRGNLRASHWQEVADSMaaqcPLSDPPKSSIQCRHKMEKLRKRYRSEIQRIGNTprGHRYPSSWVHFTRMD 120 8*************************************64433344589******************99988775313566789****9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MANSYSPSSS QEPANPQPST SSRRLPPPCW SDEETVALID AYRDKWYSLR RGNLRASHWQ 60 EVADSMAAQC PLSDPPKSSI QCRHKMEKLR KRYRSEIQRI GNTPRGHRYP SSWVHFTRMD 120 SMELGSDPSD DPTHQDEEEE DENQNNLLLY PKGIKQSIRI PLNRRQQGSI GNGNRNGVRI 180 KIPNIAAVPP PSSVLNLYNS NRSLDDYPPL MNPYYGSGKD RNVGVKRRVE DGDNPMDEMV 240 AAIGKLGDGI LKVERMKMDM AKELESMRLK MEMKRTEMIL ESQQKLVDSF STTVMEKKKK 300 KIKRIPTPES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44730.1 | 2e-47 | Trihelix family protein |