PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024984015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 365aa MW: 40764.5 Da PI: 5.8349 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.8 | 5e-18 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d++++ G g+W++ ++ g++R++k+c++rw +yl XP_024984015.1 15 KGPWTPEEDQKLIDYIERNGHGSWRALPALAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 56.6 | 5.9e-18 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E++l+++++ lG++ W++Ia +++ gRt++++k++w+++l XP_024984015.1 68 RGNFTEDEEKLIIHLHSHLGNK-WSAIATHLP-GRTDNEIKNFWNTHL 113 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 365 aa Download sequence |
MMGRSSSSDE SGLKKGPWTP EEDQKLIDYI ERNGHGSWRA LPALAGLNRC GKSCRLRWTN 60 YLRPDIKRGN FTEDEEKLII HLHSHLGNKW SAIATHLPGR TDNEIKNFWN THLKKKLLQM 120 GIDPVTHQPR TDHLDILAHL PQLLAMAANN LGATNLLNPS FFDMNLTTLM SQSEATEIAK 180 FQLLQNILQV LSTNNTTTSI PQNIDQFYAV QLSEYLKLNP QHLQNLQELA MNEAQTTSSL 240 PSFSAHDFVS PSYSNLELDH QEGSKGVGEQ HGMTVGKEEY GRFESVPPLV PASPENVNGG 300 GKGRSDGGDT HIELGNTSLL TKQNEHLSSS TSTTTIDANW QDFMDDEATG CYWKEIIERT 360 SPSWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16770.2 | 2e-97 | MYB family protein |