PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024984003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | FAR1 | ||||||||
Protein Properties | Length: 253aa MW: 28946.4 Da PI: 5.8222 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 90.5 | 2.3e-28 | 89 | 176 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGF +r+sk ++s+ +g+ + r +vC+keg+r ++k++ k r+raetr+gC+a++ v+k ++gkw++tk+++eH+H+l+p XP_024984003.1 89 FYNAYATRVGFVIRVSKLSRSRCDGTAIGRALVCNKEGFRMPDKRE--KIVRQRAETRVGCRAMVLVRKVSSGKWVITKFVKEHTHPLTP 176 ******************************************9988..9**************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MDFEVDDDVN SEELLNSADM EGRKGDEDGI VGCSIEGVFQ NNHDIKMDHD ESERGMLPLD 60 GAHTINDSLL VEEPYVGQEF ESEGAAHAFY NAYATRVGFV IRVSKLSRSR CDGTAIGRAL 120 VCNKEGFRMP DKREKIVRQR AETRVGCRAM VLVRKVSSGK WVITKFVKEH THPLTPGRGR 180 GDLIYDQYPN EHDKVRELSQ QLATEKRRSA TYKRHLEMIF EHIEEHNQSL SKKIQEIVNN 240 VNEIESNEIE TRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 2e-95 | FAR1 family protein |