PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024983876.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB | ||||||||
Protein Properties | Length: 209aa MW: 25060.6 Da PI: 10.269 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59 | 1.1e-18 | 10 | 57 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd ll + vk++G g+W+++ar g++R +k+c++rw +yl XP_024983876.1 10 KGPWTTEEDSLLTEHVKLHGEGRWNSVARLAGLKRNAKSCRLRWVNYL 57 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 56.1 | 8.3e-18 | 63 | 107 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T+ E+++++d+++++G++ W+tIar ++ gRt++++k++w+++ XP_024983876.1 63 RGKITPHEEKIILDLHTRWGNR-WSTIARSLP-GRTDNEIKNYWRTH 107 8999******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MEESMRFWRK GPWTTEEDSL LTEHVKLHGE GRWNSVARLA GLKRNAKSCR LRWVNYLRPD 60 LKRGKITPHE EKIILDLHTR WGNRWSTIAR SLPGRTDNEI KNYWRTHFKK KGKLNSDDSV 120 KLKARLLKRQ KFQQEQRNQI QLQKNKEDME KVLLLLEESN SKVASRHQDM VHEEMPSVLY 180 PMTFNDSQHV VETNSMYDDF VLWDGLWNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13480.1 | 2e-76 | MYB family protein |