PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024983758.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ERF | ||||||||
Protein Properties | Length: 180aa MW: 18734.9 Da PI: 4.6174 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61 | 2.7e-19 | 18 | 69 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++++g+Wv+eIr+p+ + r++lg+f t+e+Aa a++ a+++l+g XP_024983758.1 18 PKYRGVRQRRSSGKWVSEIREPK----SpNRIWLGTFPTPEMAAVAYDVAALALKG 69 79*******************93....578**********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MSKSSETSPL ASSSGKHPKY RGVRQRRSSG KWVSEIREPK SPNRIWLGTF PTPEMAAVAY 60 DVAALALKGG DAELNFPNSA SSLPVPASSA PRDIQAAAAN AAAASGAAMD AFLGGYGGGG 120 AAAEPPVIGG DGFIDEDLIF DMPNVLANMA EGMLLSPPRY NYYVGEETGT GNSMDHDLWN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36450.1 | 8e-37 | ERF family protein |