PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024983512.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 335aa MW: 37321.4 Da PI: 8.7663 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.9 | 3.3e-12 | 272 | 317 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el P+ +k s a++L +Av+YIk+Lq XP_024983512.1 272 SIAERVRRTRISDRMKKLQELFPTM----DKQTSTADMLDLAVQYIKDLQ 317 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 335 aa Download sequence |
MRYRSAPSSF YANLLDESGC DDFLAPVDTS SNHEPEERFF SSNQQQQQKF RSDSHEFLQY 60 ASTSASMKLE TKEAGIQKLD LPPVSTAMYG GSSQQAPHFS PCNGDGNYTN HNNLGSSSTF 120 RTMNSTSTNL IRQSSSPAGL LSSLNAETGR RDVDKGNPSS GLNNNHISFS SQPSLSPMYL 180 PQIVENTNEM NDSPYRSLKR TRDGDSKMFH SSITMDTESG ASGHYTPSLI HHTSLPKTSS 240 EKAVVEKFLR FQQDSIPCKT RAKRGCATHP RSIAERVRRT RISDRMKKLQ ELFPTMDKQT 300 STADMLDLAV QYIKDLQKDL QTLNNARARC TCSSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42280.1 | 8e-55 | bHLH family protein |