PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024983512.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 335aa    MW: 37321.4 Da    PI: 8.7663
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024983512.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.93.3e-12272317655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el P+     +k  s a++L +Av+YIk+Lq
  XP_024983512.1 272 SIAERVRRTRISDRMKKLQELFPTM----DKQTSTADMLDLAVQYIKDLQ 317
                     689*********************7....688*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MRYRSAPSSF YANLLDESGC DDFLAPVDTS SNHEPEERFF SSNQQQQQKF RSDSHEFLQY  60
ASTSASMKLE TKEAGIQKLD LPPVSTAMYG GSSQQAPHFS PCNGDGNYTN HNNLGSSSTF  120
RTMNSTSTNL IRQSSSPAGL LSSLNAETGR RDVDKGNPSS GLNNNHISFS SQPSLSPMYL  180
PQIVENTNEM NDSPYRSLKR TRDGDSKMFH SSITMDTESG ASGHYTPSLI HHTSLPKTSS  240
EKAVVEKFLR FQQDSIPCKT RAKRGCATHP RSIAERVRRT RISDRMKKLQ ELFPTMDKQT  300
STADMLDLAV QYIKDLQKDL QTLNNARARC TCSSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.18e-55bHLH family protein