PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024983337.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | MYB_related | ||||||||
Protein Properties | Length: 79aa MW: 9128.13 Da PI: 9.5505 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.9 | 7.1e-11 | 14 | 59 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 +WT++ +l+ +a + + + +W +Iar +g g++++++k ++ XP_024983337.1 14 SWTPQQNKLFERALAVYDRDtpdRWQKIARAVG-GKSAEEVKRHYEV 59 7*****************99*************.**********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 79 aa Download sequence |
MASNSLYSSS SSSSWTPQQN KLFERALAVY DRDTPDRWQK IARAVGGKSA EEVKRHYEVL 60 IEDLRHIESG NVPFPNYRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.1 | 7e-34 | MYB_related family protein |